Based on 23andMe / Nature 2026 data (N=27,885). All estimates relative to double-reference genotype on tirzepatide.
| GLP1R rs10305420 | GIPR rs1800437 | Drug | Vomiting Risk | Weight Loss Prediction |
|---|---|---|---|---|
| Ref/Ref | Ref/Ref | Tirzepatide | Reference (baseline) | Average expected response |
| Effect/Ref | Ref/Ref | Semaglutide | Moderately elevated | +0.76 kg additional loss (per allele) |
| Ref/Ref | Risk/Ref | Tirzepatide | Elevated — GIPR buffer reduced | No weight loss impact detected |
| Effect/Effect | Risk/Risk | Tirzepatide | ~15× above baseline | Incremental weight loss offset by tolerability challenges |
| Effect/Ref | Ref/Ref | Tirzepatide | Moderately elevated (GLP1R signal) | Enhanced efficacy expected; monitor GI tolerance |
| Gene | rsID | Function | Metabolic Relevance | GLP-1 Interaction | Evidence |
|---|---|---|---|---|---|
| TCF7L2 | rs7903146 | Transcription factor, β-cell function, incretin sensitivity | Strongest common T2D risk gene. Risk T allele reduces incretin-stimulated insulin secretion by ~30%. | Risk allele carriers show attenuated glycemic response to GLP-1RAs in multiple RCTs. Affects insulinotropic but not necessarily weight loss arm. | High · PMID 28878247 |
| FTO | rs9939609 | Fat mass & obesity-associated, appetite/hypothalamic | Risk A allele: +0.39 kg/m² BMI per allele, reduced satiety signaling. Affects food intake circuits overlapping with GLP-1 central mechanisms. | FTO risk variants associated with increased food intake and reduced satiety — the same pathways modulated by GLP-1's central actions. May require higher effective doses. | High · PMID 17554300 |
| MC4R | Multiple rare variants | Melanocortin 4 receptor — most common monogenic obesity gene | Pathogenic MC4R variants: most common genetic obesity cause (~1.4% of severe obesity). Historically, MC4R-deficient patients were thought to be drug-resistant. | Tirzepatide effective even in MC4R mutation carriers — SURMOUNT-1 data (N=32 MC4R carriers) showed comparable 18.3% weight loss vs. 19.9% non-carriers. This is clinically important: MC4R status does not contra-indicate GLP-1/GIP therapy. | High · Nature Med 2025 |
| PCSK9 | rs11591147 | Proprotein convertase — LDL receptor degradation | Loss-of-function variant (R46L): ~50% LDL reduction, strong cardiovascular protection. Gain-of-function: elevated LDL, familial hypercholesterolemia risk. | Indirect relevance: GLP-1 medications have cardiovascular benefits (SELECT trial). PCSK9 variants contextualize cardiovascular risk profile that GLP-1 therapy partially addresses. | High · PMID 26631059 |
| ADRB3 | rs4994 | β3-adrenergic receptor — adipose tissue thermogenesis | Trp64Arg variant: reduced resting metabolic rate, impaired lipolysis in visceral fat, higher obesity risk in carriers. Associated with impaired weight loss on caloric restriction. | ADRB3 Arg64 carriers may have blunted thermogenic response. GLP-1 drugs act partly through enhanced energy expenditure — this variant may modulate that arm of the mechanism. | Moderate · PMID 7671580 |
| PPARG | rs1801282 | Peroxisome proliferator-activated receptor γ — adipogenesis, insulin sensitivity | Pro12Ala: minor Ala allele protective — improved insulin sensitivity, ~20% reduced T2D risk. Modulates adipocyte differentiation and fat distribution. | PPARG Pro12Ala interacts with dietary fat composition and metabolic drug efficacy. Ala allele carriers may have better baseline insulin sensitivity context for GLP-1 therapy. | Moderate · PMID 9614458 |
| GCG | Regulatory variants | Proglucagon gene — encodes GLP-1, GLP-2, glucagon, oxyntomodulin | GCG encodes the precursor that is post-translationally cleaved into GLP-1 and GLP-2, among other peptides. Variants in GCG regulatory regions may affect baseline GLP-1 secretion. | Relevant as triple agonists (retatrutide) entering Phase 3 include glucagon receptor co-activation. GCG variants will be added to this report as pipeline agents advance to clinical use. | Monitoring · Pipeline relevance |
| Gene | rsID / Variant | Chr Position (hg38) | Risk Allele | Population Freq. | Effect | Primary Citation |
|---|---|---|---|---|---|---|
| GLP1R | rs10305420 | 6:39,014,832 | T (Ala316Thr) | ~15–20% EUR | ↑ Weight loss efficacy; ↑ nausea/vomiting on GLP-1 medications | Auton et al., Nature 2026 |
| GLP1R | rs6923761 | 6:39,016,555 | A (Gly168Ser) | ~30% EUR | AA: ↑ obesity risk, ↑ fasting glucose; alters receptor coupling | Michałowska et al., Front Endocrinol 2022 |
| GLP1R | rs2268641 | 6:39,021,104 | T | ~35% EUR | TT: lower obesity frequency in Polish cohort; downstream signaling modulation | Michałowska et al., Front Endocrinol 2022 |
| GIPR | rs1800437 | 19:45,892,628 | C (Glu354Gln) | ~38% EUR | ↑↑ Vomiting risk on tirzepatide; no signal on semaglutide; reduces GIP buffer effect | Auton et al., Nature 2026 NEW |
| ARRB1 | rs140226575 | 11:74,896,241 | A | ~5% EUR | ↓ GLP1R internalization efficiency; ↓ glycemic response to GLP-1RAs | Dawed et al., Lancet Diab Endocrinol 2023 |
| ARRB1 | Thr370Met | 11:74,898,103 | T | Rare | Biased GLP1R signaling; altered beta-arrestin recruitment, attenuated HbA1c reduction | Dawed et al., Lancet Diab Endocrinol 2023 |
| TCF7L2 | rs7903146 | 10:112,998,590 | T | ~30% EUR | ↓ Incretin-stimulated insulin secretion ~30%; ↑ T2D risk; attenuated HbA1c response to GLP-1RAs | Pearson et al., Diabetologia 2017 · PMID 28878247 |
| FTO | rs9939609 | 16:53,820,527 | A | ~45% EUR | +0.39 kg/m² BMI per allele; ↓ satiety signaling; ↑ food intake reward-driven behavior | Frayling et al., Science 2007 · PMID 17554300 |
| FTO | rs1558902 | 16:53,803,574 | A | ~42% EUR | +0.39 kg/m² BMI per risk allele; correlated with reduced satiety hormone response | Locke et al., Nature 2015 · PMID 25673413 |
| MC4R | Multiple pathogenic | 18:57,851,099 | Various LoF | ~1.4% severe obesity | Most common monogenic obesity cause; tirzepatide effective in carriers (SURMOUNT-1) | Loos et al., Nature Med 2025 · PMID 38740993 |
| PCSK9 | rs11591147 | 1:55,505,647 | T (R46L LoF) | ~2% EUR | LoF: ~50% LDL reduction, strong CV protection; GoF: familial hypercholesterolemia risk | Cohen et al., NEJM 2006 · PMID 26631059 |
| ADRB3 | rs4994 (Trp64Arg) | 8:37,660,354 | C (Arg64) | ~10% EUR; ~30% Asian | ↓ Resting metabolic rate; ↓ lipolysis in visceral adipose; ↓ thermogenic response | Walston et al., NEJM 1995 · PMID 7671580 |
| PPARG | rs1801282 (Pro12Ala) | 3:12,351,626 | G (Pro12) | ~75% EUR carry Pro/Pro | Ala allele: ↑ insulin sensitivity, ~20% ↓ T2D risk; Pro/Pro: slightly ↓ insulin sensitivity | Altshuler et al., Nature Genet 2000 · PMID 9614458 |
| GCG | Regulatory | 2q24.2 | – | – | Encodes GLP-1, GLP-2, glucagon precursor. Monitoring for triple agonist pipeline relevance. | Monitoring status |